RTCGA (version 1.2.2)

installTCGA: Install packages from RTCGA family

Description

Function installs data packages from https://github.com/RTCGA/. Packages are listed datasetsTCGA.

Usage

installTCGA(packages = c("RTCGA.clinical", "RTCGA.mutations", "RTCGA.rnaseq", "RTCGA.RPPA", "RTCGA.mRNA", "RTCGA.CNV", "RTCGA.miRNASeq", "RTCGA.PANCAN12", "RTCGA.methylation"), build_vignettes = TRUE, ...)

Arguments

packages

A character specifing the names of the data packages to be installed. By default installs all packages.

build_vignettes

Should vignettes be build.

...

Further arguments passed to install_github.

Issues

If you have any problems, issues or think that something is missing or is not clear please post an issue on https://github.com/RTCGA/RTCGA/issues.

See Also

RTCGA website http://rtcga.github.io/RTCGA.

Other RTCGA: RTCGA-package, boxplotTCGA, checkTCGA, convertTCGA, datasetsTCGA, downloadTCGA, expressionsTCGA, heatmapTCGA, infoTCGA, kmTCGA, mutationsTCGA, pcaTCGA, readTCGA, survivalTCGA, theme_RTCGA

Examples

## Not run: 
# installTCGA()
# installTCGA('RTCGA.clinical')
# ## End(Not run)