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qtl (version 1.38-4)

map2table: Convert genetic map from list to table.

Description

Convert a map object (as a list) to a table (as a data frame).

Usage

map2table(map, chr)

Arguments

map
A map object: a list whose components (corresponding to chromosomes) are either vectors of marker positions or matrices with two rows of sex-specific marker positions.
chr
Optional vector indicating the chromosomes to consider. This should be a vector of character strings referring to chromosomes by name; numeric values are converted to strings. Refer to chromosomes with a preceding - to have all chromos

Value

  • A data frame with two or three columns: chromosome and sex-averaged position, or chromosome, female position, and male position.

    The row names are the marker names.

See Also

pull.map, est.map

Examples

Run this code
data(fake.f2)
map <- pull.map(fake.f2)
map_as_tab <- map2table(map)

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