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BoneProfileR (version 3.1)

Tools to Study Bone Compactness

Description

Bone Profiler is a scientific method and a software used to model bone section for paleontological and ecological studies. See Girondot and Laurin (2003) and Gônet, Laurin and Girondot (2022) .

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Version

Install

install.packages('BoneProfileR')

Monthly Downloads

207

Version

3.1

License

GPL-2

Maintainer

Marc Girondot

Last Published

August 24th, 2024

Functions in BoneProfileR (3.1)

BP_GetFittedParameters

Return the fitted parameters
plot.BoneProfileR

Plot a bone section
summary.BoneProfileR

Plot a bone section
BP_LnLCompactness

Estimation of the likelihood of a bone section
BP

Run a shiny application to fit bone section
BP_EstimateCompactness

Estimation of the compactness of a bone section
BP_ChooseForeground

Let the user to choose the foreground color of an image
BP_ChooseCenter

Let the user to choose the center of the bone
BP_ChooseBackground

Let the use to choose the background color of an image
BP_DetectBackground

Detects the background color of an image
BP_DetectForeground

Detects the foreground color of an image
BP_DuplicateAnalysis

Duplicates an analysis stored in an object
BP_AutoFit

Fit model automatically
BP_DetectCenters

Detect the centers of an image
BP_FitMLRadialCompactness

Estimation of the likelihood of a bone section
BoneProfileR-package

A Model for Bone Compactness.
BP_ListAnalyses

List the analyses stored in an object
Erinaceus_europaeus

Example of hedgehog femur
BP_OpenImage

Open an image
BP_FitBayesianCompactness

Estimation of Bayesian model of a bone section
BP_Report

Generate a pdf report for the analyzed bone
BP_FitMLCompactness

Estimation of the likelihood of a bone section