Rdocumentation
powered by
Learn R Programming
⚠️
There's a newer version (2.7-2) of this package.
Take me there.
vegan (version 1.6-4)
Community Ecology Package
Description
Ordination methods and other useful functions for community and vegetation ecologists.
Copy Link
Link to current version
Version
Version
2.7-2
2.7-1
2.6-10
2.6-8
2.6-6.1
2.6-6
2.6-4
2.6-2
2.4-2
2.4-1
2.4-0
2.3-5
2.3-4
2.3-3
2.3-2
2.3-1
2.3-0
2.2-1
2.2-0
2.0-10
2.0-9
2.0-8
2.0-7
2.0-6
2.0-5
2.0-4
2.0-3
2.0-2
2.0-1
2.0-0
1.17-12
1.17-11
1.17-10
1.17-9
1.17-8
1.17-7
1.17-6
1.17-5
1.17-4
1.17-3
1.17-2
1.17-1
1.17-0
1.15-4
1.15-3
1.15-2
1.15-1
1.15-0
1.13-2
1.13-1
1.13-0
1.11-4
1.11-3
1.11-2
1.11-0
1.8-8
1.8-7
1.8-6
1.8-5
1.8-4
1.8-3
1.8-2
1.8-1
1.6-10
1.6-9
1.6-8
1.6-7
1.6-6
1.6-5
1.6-4
1.6-3
1.6-2
1.6-1
1.6-0
1.4-4
1.4-3
1.4-2
1.4-1
1.4-0
1.2-1
1.2-0
1.0-1
Install
install.packages('vegan')
Monthly Downloads
141,487
Version
1.6-4
License
GPL2
Maintainer
Jari Oksanen
Last Published
October 8th, 2025
Functions in vegan (1.6-4)
Search all functions
rankindex
Compares Dissimilarity Indices for Gradient Detection
vegdist
Dissimilarity Indices for Community Ecologists
decorana
Detrended Correspondence Analysis and Basic Reciprocal Averaging
cca
[Partial] [Constrained] Correspondence Analysis and Redundancy Analysis
anova.cca
Permutation Test for Constrained Correspondence Analysis, Redundancy Analysis and Constrained Analysis of Principal Coordinates
mantel
Mantel Test for Two Dissimilarity Matrices
vegan-internal
Internal vegan functions
decostand
Standardizaton Methods for Community Ecology
initMDS
Random Start and Axis Scaling for isoMDS
procrustes
Procrustes Rotation of Two Configurations
ordiplot
Alternative plot and identify Functions for Ordination
specaccum
Species Accumulation Curves
fisherfit
Fit Fisher's Logseries and Preston's Lognormal model to Abundance Data
humpfit
No-interaction Model for Hump-backed Species Richness vs. Biomass
plot.cca
Plot or Extract Results of Constrained Correspondence Analysis or Redundancy Analysis
ordisurf
Smooths Variables and Plots Contours on Ordination.
deviance.cca
Statistics Resembling Deviance and AIC for Constrained Ordination
read.cep
Reads a CEP (Canoco) data file
vegemite
Prints a Compact, Ordered Vegetation Table
anosim
Analysis of Similarities
BCI
Barro Colorado Island Tree Counts
distconnected
Connectedness and Minimum Spanning Tree for Dissimilarities
radfit
Rank -- Abundance or Dominance / Diversity Models
scores
Get Species or Site Scores from an Ordination
specpool
Extrapolated Species Richness in a Species Pool
ordihull
Add Graphical Items to Ordination Diagrams
diversity
Ecological Diversity Indices and Rarefaction Species Richness
bioenv
Best subset of environmental variables with maximum (rank) correlation with community dissimilarities.
dune
Vegetation and Environment in Dutch Dune Meadows.
stepacross
Stepacross as Flexible Shortest Paths or Extended Dissimilarities
capscale
[Partial] Constrained Analysis of Principal Coordinates
make.cepnames
Abbreviates a Botanical or Zoological Latin Name into an Eight-character Name
envfit
Fits an Environmental Vector or Factor onto an Ordination
varespec
Vegetation and environment in lichen pastures
wascores
Weighted Averages Scores for Species