Learn R Programming
⚠️There's a newer version (4.60.0) of this package.Take me there.

umx (version 1.2.5)

Structural Equation Modelling in R with 'OpenMx'

Description

Create, run, and report structural equation and twin models quickly. If you're just starting out, try typing '?umx'.

Copy Link

Version

Install

install.packages('umx')

Monthly Downloads

3,500

Version

1.2.5

License

GPL-3

Issues

21

Pull Requests

4

Stars

48

Forks

18

Maintainer

Timothy C Bates

Last Published

April 3rd, 2016

Functions in umx (1.2.5)

loadings.MxModel

loadings.MxModel
umx_as_numeric

umx_as_numeric
umxACE

umxACE
umxCompare

umxCompare
umx_find_object

umx_find_object
umx_get_checkpoint

umx_get_checkpoint
umxPadAndPruneForDefVars

umxPadAndPruneForDefVars
umx_lower2full

umx_lower2full
summaryAPA

summaryAPA
umx_set_plot_format

umx_set_plot_format
umxPath

umxPath: Flexible specification of sem paths
umxFactor

umxFactor
umxPlotGxE

umxPlotGxE
umxSummary

umxSummary.default
umxFixAll

umxFixAll
umxGetParameters

umxGetParameters
umx_fix_first_loadings

umx_fix_first_loadings
umx_get_bracket_addresses

get mat[r,c] style cell address from an mxMatrix
xmu_dot_make_paths

xmu_dot_make_paths (not for end users)
ex9_6

A multilevel dataset.
umx_set_table_format

umx_set_table_format
qm

qm
umx_grep

umx_grep
umxCovData

umxCovData
umxACESexLim

umxACESexLim
umxLatent

umxLatent
confint.MxModel

Get confidence intervals from an MxModel
logLik.MxModel

logLik.MxModel
umxLabel

umxLabel
umxSummaryACE

umxSummaryACE
umx_cont_2_ordinal

umx_cont_2_ordinal
xmuMakeTwoHeadedPathsFromPathList

xmuMakeTwoHeadedPathsFromPathList
umx_reorder

umx_reorder
umxJiggle

umxJiggle
RMSEA.summary.mxmodel

RMSEA function for MxModels
umxGxE_window

umxGxE_window
umxSummary.MxModel

umxSummary.MxModel
umxCov2cor

umxCov2cor
umxThresholdMatrix

umxThresholdMatrix
umxEFA

umxEFA
umxDiagnose

mxDiagnostic
umx_check_names

umx_check_names
umxHetCor

umxHetCor
umxSummaryCP

umxSummaryCP
umx_cov2raw

Turn a cov matrix into raw data
umx_make_TwinData

umx_make_TwinData
xmuLabel_RAM_Model

xmuLabel_RAM_Model (not a user function)
umx_check_OS

umx_check_OS
umx_APA_pval

umx_APA_pval
umx_add_variances

umx_add_variances
xmuMakeDeviationThresholdsMatrices

Make deviation threshold matrics
umx_fake_data

umx_fake_data
umx_get_cores

umx_get_cores
plot.MxModel

Create a graphical figure from an MxModel
umx_has_CIs

umx_has_CIs
umx_scale

umx_scale
RMSEA

Generic RMSEA function
umxCI

umxCI
umxAdd1

umxAdd1
umxCI_boot

umxCI_boot
umx_rename_file

umx_rename_file
umxEval

umxEval
umx_cor

umx_cor
umxGxE

umxGxE
extractAIC.MxModel

extractAIC from MxModel
xmu_start_value_list

Make start values
xmu_dot_make_residuals

xmu_dot_make_residuals (not for end users)
umxCP

umxCP
umxMI

umxMI
umx-deprecated

Deprecated. May already stop() code and ask to be updated. May be dropped entirely in future.
umx_RAM_ordinal_objective

umx_RAM_ordinal_objective
umxIP

umxIP
umxExpCov

umxExpCov
umx_explode

umx_explode - like the php function `explode`
umx_msg

umx_msg
umxEquate

umxEquate
umx_merge_CIs

umx_merge_CIs
umx_has_square_brackets

umx_has_square_brackets
umxDrop1

umxDrop1
RMSEA.MxModel

RMSEA function for MxModels
umx_is_endogenous

umx_is_endogenous
umxSummaryIP

umxSummaryIP
umx_time

umx_time
umxSummaryGxE

umxSummaryGxE
umx_rename

umx_rename
umx_APA_model_CI

umx_APA_model_CI
umx_drop_ok

umx_drop_ok
xmuLabel_Matrix

xmuLabel_Matrix (not a user function)
umxPlotCP

umxPlotCP
umx_check_parallel

umx_check_parallel
umx_is_MxMatrix

umx_is_MxMatrix
umx_set_auto_run

umx_set_auto_run
umx_apply

umx_apply
umxCF_SexLim

umxCF_SexLim
loadings

loadings Generic loadings function
umx_rot

umx_rot
umxModify

umxModify
umx_show

umx_show
umx_check_model

umx_check_model
umx_standardize_ACE

umx_standardize_ACE
umx_aggregate

umx_aggregate
umxReduce

umxReduce
umx_has_means

umx_has_means
umx_standardize_CP

umx_standardize_CP
umx_cov_diag

umx_cov_diag
umx_means

umx_means
umxValues

umxValues
umx_has_been_run

umx_has_been_run
umx_standardize_RAM

umx_standardize_RAM
xmuMinLevels

xmuMinLevels
umxUnexplainedCausalNexus

umxUnexplainedCausalNexus
umx_get_optimizer

umx_get_optimizer
umx_is_ordered

umx_is_ordered
umx_sql_from_excel

umx_sql_from_excel
umx_is_MxModel

umx_is_MxModel
umx_read_lower

Read lower-triangle of data matrix from console or file
umx_swap_a_block

umx_swap_a_block
umxPlotIP

umxPlotIP
umx_standardize_ACEcov

umx_standardize_ACEcov
umx_is_exogenous

umx_is_exogenous
us_skinfold_data

Anthropometric data on twins
umx_residualize

umx_residualize
residuals.MxModel

Get residuals from an MxModel
umx_is_cov

umx_is_cov
umx_set_cores

umx_set_cores
umx_pb_note

umx_pb_note
umxExpMeans

umxExpMean
xmuMaxLevels

xmuMaxLevels
umx_set_checkpoint

umx_set_checkpoint
xmuLabel_MATRIX_Model

xmuLabel_MATRIX_Model (not a user function)
umx_print

umx_print
umx_string_to_algebra

umx_string_to_algebra
umx_scale_wide_twin_data

umx_scale_wide_twin_data
umxFitIndices

umxFitIndices
umx_set_optimizer

umx_set_optimizer
umx_round

umx_round
umxSummaryACEcov

umxSummaryACEcov
xmuMI

xmuMI
umx_is_RAM

umx_is_RAM
umx_fix_latents

umx_fix_latents
xmuPropagateLabels

xmuPropagateLabels (not a user function)
umxACEcov

umxACEcov
xmuHasSquareBrackets

xmuHasSquareBrackets
umx_trim

umx_trim
umx_make_bin_cont_pair_data

umx_make_bin_cont_pair_data
xmuMakeOneHeadedPathsFromPathList

xmuMakeOneHeadedPathsFromPathList
umxPlotACEcov

umxPlotACEcov
umxPlotACE

umxPlotACE
umxRAM

umxRAM
umx_fun_mean_sd

umx_fun
umx_move_file

umx_move_file
umx_open

umx_open
getOpenMx

getOpenMx
dl_from_dropbox

dl_from_dropbox
umx_check

umx_check
umx_paste_names

umx_paste_names
reliability

reliability
umx

Helper Functions for Structural Equation Modelling in OpenMx
umxSetParameters

umxSetParameters
umxRun

umxRun
umx_default_option

umx_default_option
umx_names

umx_names
umx_set_auto_plot

umx_set_auto_plot
umx_standardize_IP

umx_standardize_IP
umx_object_as_str

umx_object_as_str
xmuMakeThresholdsMatrices

xmuMakeThresholdsMatrices (not a user function)