graphite (version 1.12.0)

pathwayGraph: Graph representing the topology of a pathway

Description

Builds a graphNEL object representing the topology of a pathway.

Usage

pathwayGraph(pathway, edge.types=NULL)

Arguments

pathway

a pathway object.

edge.types

keep only the edges maching the type names in this vector.

Value

A graphNEL object.

See Also

pathway-class

graphNEL-class

Examples

pathwayGraph(reactome$`mTOR signalling`, edge.types=c("binding"))