Plot model validation criteria
# S3 method for EPoC.validation.W
plot(x, ...)
# S3 method for EPoC.validation.pred
plot(x, ...)An object of type EPoC.validation.W or EPoC.validation.W respectively.
Parameters passed down to underlying functions, plot, lines, points, abline.
Plot Kendall W or prediction error, respectively on the y-axis, network size on the upper x-axis and \(\lambda\) on the lower x-axis. The plot fit a loess model of degree 1 to the points from the input object and finds the largest network size and corresponding \(\lambda\) such that W is maximized or prediction error is minimized, respectively.
Rebecka J<U+00F6>rnsten, Tobias Abenius, Teresia Kling, Linn<U+00E9>a Schmidt, Erik Johansson, Torbj<U+00F6>rn Nordling, Bodil Nordlander, Chris Sander, Peter Gennemark, Keiko Funa, Bj<U+00F6>rn Nilsson, Linda Lindahl, Sven Nelander. (2011) Network modeling of the transcriptional effects of copy number aberrations in glioblastoma. Molecular Systems Biology 7 (to appear)