Usage
## S3 method for class 'stslist.statd':
plot(x, type = "d", cpal = NULL, ylab = NULL,
yaxis = TRUE, xaxis = TRUE, xtlab = NULL, cex.plot = 1,
space=0, ...)
Arguments
x
an object of class stslist.statd
as produced by the seqstatd
function. type
if "d"
(default), a state distribution plot is produced. If "Ht"
an entropy index plot is produced.
cpal
alternative color palette to use for the states. If user specified, a vector of colors with number of elements equal to the number of states in the alphabet. By default, the 'cpal' attribute of the x
object is used.
ylab
an optional label for the y axis. If set to NA, no label is drawn.
yaxis
if TRUE or "cum", the y axis is plotted with a label showing the cumulated percentage frequency of the displayed sequences. If "pct", the percentage value for each sequence is displayed.
xaxis
if TRUE (default) the xaxis is plotted.
xtlab
optional labels for the x axis ticks. If unspecified, the names
attribute of the input object is used.
cex.plot
expansion factor for setting the size of the font for the axis labels and names. The default value is 1. Values lesser than 1 will reduce the size of the font, values greater than 1 will increase the size.
space
the space between the stacked bars. Default to 0, i.e. no space.
...
further graphical parameters. For example border=NA
to remove the bars borders, space=0
to remove space between sequences. For more details about the graphical parameter arguments, see barplot
and par
.