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cobindR (version 1.10.0)

plot.tfbslogo: function to plot sequence logos based on hits of tools

Description

plot.tfbslogo produces a sequence logo based on all hits per position weight matrix. If a file path is specified in pdf.name, sequences logos will be written into the specified file.

Usage

"plot.tfbslogo"(x, pwms)

Arguments

x
Object
pwms
vector of names of position weight matrices used for searching the sequences. For each pwm a new sequence logo based on the hits is produced.