Plot LOD curves for a genome scan of self and neighbor QTL effects.
plot_nei(res, type = c("neighbor", "self", "int"), chr = NULL, th = NULL, ...)Output results of scan_neighbor().
Plot "self", "neighbor" or "int" effects. Default is "neighbor" effects.
An optional vector to select chromosome numbers to be plotted. If NULL, shown are all chromosomes.
Add genome-wide threshold by user-defined vectors or Bonferroni correction. Default is no thresholds added.
Arguments to be passed to plot().
For the type argument, "int" can be selected to draw the results of int_neighbor().
In this case, the res object and type must match, otherwise it returns an error message.