psimi25Experiment-class

 Representing an experiment recorded in PSI-MI 2.5 XML files

classes

Queries, data structure and interface to visualization of interaction datasets. This package inplements the PSI-MI 2.5 standard and supports up to now 8 databases. Further databases supporting PSI-MI 2.5 standard will be added continuously.

Jitao David Zhang

RpsiXML

R interface to PSI-MI 2.5 files

psimi25Experiment-class function

The object is usually only initialized internally

Objects from the Class

<dl>
    <dt><code>sourceDb</code>:</dt><dd>Object of class <code>"character"</code>, source
      database short label</dd> <dt><code>sourceId</code>:</dt><dd>Object of class <code>"character"</code>,
      experiment ID of the source database</dd> <dt><code>interactionType</code>:</dt><dd>Object of class <code>"character"</code>,
      interaction type, "Y2H","vv", etc</dd> <dt><code>expPubMed</code>:</dt><dd>Object of class <code>"character"</code>, PubMed ID
      of the experiment </dd> </dl> 

Slots

No methods defined with class "psimi25Experiment" in the signature.

psimi25Experiment-class: Class "psimi25Experiment"

Description

Arguments

Objects from the Class

Slots

Methods

Examples