osmose (version 0.1.0)

read_osmose: Read OSMOSE outputs into an R object

Description

This function create object of class osmose with the outputs from OSMOSE in the path folder.

Usage

read_osmose(path = NULL, version = "v3r2", species.names = NULL, ...)

Arguments

path

Path to the directory containing OSMOSE outputs.

version

OSMOSE version used to run the model.

species.names

Display names for species, overwrite the species names provided to the OSMOSE model. Used for plots and summaries.

...

Additional arguments

Details

A list of class osmose is created, individual elements can be extracted using the function getVar.

Examples

# NOT RUN {
{
  outdir = system.file("extdata", "outputs/", package="osmose")
  read_osmose(outdir)
}
# }