object and
conLin (assuming spherical within-group covariance structure),
evaluated at coef(object) is calculated and added to the
logLik component of conLin. The settings
attribute of object determines whether the log-likelihood, or
the restricted log-likelihood, is to be calculated. The computational
methods for the (restricted) log-likelihood calculations are described
in Bates and Pinheiro (1998).## S3 method for class 'reStruct':
recalc(object, conLin, \dots)reStruct,
representing a random effects structure and consisting of a list of
pdMat objects."Xy", corresponding to a regression matrix
(X) combined with a response vector (y), and
"logLik", corresponding to the log-llogLik component updated.reStruct, logLik,
lme