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freesurfer (version 1.6.8)

reconner: Reconstruction Helper for recon from Freesurfer

Description

Wrapper for the recon-all function in Freesurfer

Usage

reconner(
  infile = NULL,
  outdir = NULL,
  subjid = NULL,
  verbose = TRUE,
  opts = "-all",
  force = FALSE
)

Arguments

infile

Input filename (dcm or nii)

outdir

Output directory

subjid

subject id

verbose

print diagnostic messages

opts

Additional options

force

Force running of the reconstruction

Value

Result of system