
Return the coordinate indices for the provided residue indices.
res2xyz(res.idc)
Indicies of residues to convert to coordinate indices
Vector of coordinate indicies to be applied to pdb$xyz
Using the residue indices of the atoms
base::data.frame()
(e.g., pdb$atom
) determine the
coodinate indices of the residue atoms (e.g., pdb$xyz
).
Other utilities: ConservationSet
,
DetermineChainsOfInterest
,
ExtractFileTimeStamp
,
ExtractPDBids
, FileTimeStamp
,
HasXWaters
, Nearby
,
ProtHetWatIndices
,
RescaleValues
,
RetainChainsOfInterest
,
ReturnPDBfullPath
,
StandardizeAsparticAcidNames
,
StandardizeCysteineNames
,
StandardizeGlutamicAcidNames
,
StandardizeHistidineNames
,
StandardizeLysineNames
,
TimeSpan
, UniqueAtomHashes
,
aaStandardizeNames
,
getAtomTypeCounts
,
getResTypeCounts
,
resAtomType2AtomClass
,
write.basic.pdb
,
write.conservedWaters.pdb
# NOT RUN {
res.idc <- c(5:10)
res2xyz(res.idc)
# [1] 13 15 15 16 18 18 19 21 21 22 24 24 25 27 27 28 30
# }
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