RnBeads (version 1.4.0)

rnb.initialize.reports: rnb.initialize.reports

Description

Creates a new directory to host HTML reports and copies the shared configuration files.

Usage

rnb.initialize.reports(dir.reports, dir.configuration = "configuration")

Arguments

dir.reports

Directory to host report files. This must be a character of length one that specifies a non-existent path, as this methods attempts to create it.

dir.configuration

Subdirectory to host configuration files shared by the reports. This must be a character of length one that gives location as a path relative to dir.reports. Also, strong restrictions apply to the path name. See the description of the createReport function for more details. This method creates the directory and copies configuration files that define cascading style sheet (CSS) definitions and Javascript functions used by the HTML reports.

Value

TRUE if the report directory was successfully created and the configuration files were copied to the specified location; FALSE otherwise.

See Also

createReport for initializing an HTML report

Examples

dir.reports <- "~/infinium_studies/cancer_study/reports"
if (!rnb.initialize.reports(dir.reports)) {
    cat("ERROR: Could not initialize configuration in ", dir.reports, "\n", sep = "")
}