DESeq::estimateSizeFactors
and DESeq::estimateDispersions
.
runDESeq(geneCounts, label)
getGeneCount
.getGeneCount
,
DENBTest
,
DENBStat4GSEA
data(RCS_example, package="SeqGSEA")
geneCounts <- getGeneCount(RCS_example)
label <- label(RCS_example)
DEG <- runDESeq(geneCounts, label)
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