sample_calcomp

An SS data list object as read in from
<code><a href="/link/SS_readdat?package=ss3sim&version=0.9.0&to=r4ss" rd-options="r4ss" data-mini-rdoc="r4ss::SS_readdat">SS_readdat</a></code> in the <pkg>r4ss</pkg> package. Make sure
you select option <code>section=2</code>.

dat_list

A character string of the new file name to be created.
Must end in <code>.dat</code> or equal <code>wtatage.ss</code>.

outfile

*A numeric vector giving the fleets to be used. This order also
pertains to other arguments. A missing value excludes that fleet from
<code>outfile</code> (i.e. it turns it off so no samples are written). If none of
the fleet collected samples, keep the v

fleets

*A list the same length as <code>fleets</code> giving the years as
numeric vectors. If no fleet collected samples, keep the value to
<code>years=NULL</code>.

years

A logical switch for whether to write <code>outfile</code> to
disk. Can be turned off to speed up testing or exploration of the
function. The new data are returned invisibly, as in the examples
below.

write_file

*A numeric list of the same length as <code>fleets</code>.
Either single values or vectors of the same length as the number of
years can be passed through. Single values are repeated for all
years. If no fleet collected samples, keep the value to
<code>Ns</code>

Nsamp

Sample conditional age-at-length (CAL) data and write to file for use by
the EM.

The ss3sim package develops a framework for fisheries stock
    assessment simulation testing with Stock Synthesis 3 (SS3).

Sean Anderson

ss3sim

Fisheries Stock Assessment Simulation Testing with Stock
        Synthesis

sample_calcomp function

All function argument descriptions that start with an asterisk (*) will be passed
through the case files to <code><a href="/link/run_ss3sim?package=ss3sim&version=0.9.0" rd-options="" data-mini-rdoc="ss3sim::run_ss3sim">run_ss3sim</a></code>. If one of these arguments
is not specified in a case file, then a value of <code>NULL</code> will be passed,
which may or may not be an appropriate value. Other arguments will be ignored
if specified.

sample_calcomp: Sample conditional age-at-length (CAL) data and write to file for use by the EM.

Description

Usage

Value

Which arguments to specifiy in case files

Details

See Also