scmgene.robust

List of parameters defining the Subtype Clustering Model as published in Wirapati et al 2009 and Desmedt et al 2008 but using single genes instead of gene modules.

data

This package contains functions implementing various tasks usually required by gene expression analysis, especially in breast cancer studies: gene mapping between different microarray platforms, identification of molecular subtypes, implementation of published gene signatures, gene selection, and survival analysis.

Benjamin HaibeKains

genefu

Computation of Gene Expression-Based Signatures in Breast Cancer

scmgene.robust function

<url>http://clincancerres.aacrjournals.org/content/14/16/5158.abstract?ck=nck</url>

scmgene.robust: Subtype Clustering Model using only ESR1, ERBB2 and AURKA genes for identification of breast cancer molecular subtypes

Description

Usage

Arguments

source

References

Examples