sig.genius

List of three gene signatures which compose the Gene Expression progNostic Index Using Subtypes (GENIUS) as published by Haibe-Kains et al. 2009. GENIUSM1, GENIUSM2 and GENIUSM3  are the ER-/HER2-, HER2+ and ER+/HER2- subtype signatures respectively.

data

This package contains functions implementing various tasks usually required by gene expression analysis, especially in breast cancer studies: gene mapping between different microarray platforms, identification of molecular subtypes, implementation of published gene signatures, gene selection, and survival analysis.

Benjamin HaibeKains

genefu

Computation of Gene Expression-Based Signatures in Breast Cancer

sig.genius function

<code><a href="/link/sig.genius?package=genefu&version=2.4.2&to=genefu" rd-options="genefu" data-mini-rdoc="genefu::sig.genius">sig.genius</a></code> is a list a three subtype signatures.

sig.genius: Gene Expression progNostic Index Using Subtypes (GENIUS) as published by Haibe-Kains et al. 2010.

Description

Usage

Arguments

format

References

Examples