summary.BY: Summary of a BY object

Description

Summary of the most important results given by the BY procedure.

Usage

# S3 method for BY
summary(object, …)

Arguments

object

A BY object.

…

Additional arguments affecting the summary produced.

Value

Rejections

The number of effects declared by the BY method.

FDR

The estimated false discovery rate.

Adjusted.pvalues

Table of adjusted p-values falling under alpha.

References

Benjamini Y and Yekutieli D (2001). The control of the false discovery rate in multiple testing under dependency. Annals of Statistics 29, 1165--1188.

Dalmasso C, Broet P and Moreau T (2005) A simple procedure for estimating the false discovery rate. Bioinformatics 21:660--668

Examples

Run this code

# NOT RUN {

res<-BY(Hedenfalk$x)
summary(res) 
# }