Learn R Programming

InPAS (version 1.4.4)

totalCoverage: total coverage

Description

for huge dataset, it will read in the coverage from tmp files and merge them by groups

Usage

totalCoverage(coverage, genome, hugeData, groupList=NULL)

Arguments

coverage
coverage for each sample, outputs of coverageFromBedGraph
genome
an object of BSgenome
hugeData
hugeData or not
groupList
tag names involved in each groups

Value

a coverage list