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tpe (version 1.0.1)
tpe1d: One-dimensional tree preserving embedding
Description
Finds a one-dimensional tree preserving embedding of a dissimilarity matrix.
Usage
tpe1d(d, verbose=TRUE)
Arguments
d
A
dist
object with the dissimilarity matrix.
verbose
A logical value indicating whether to print progress.
Value
Details
Implements the greedy approximation for one-dimensional tree preserving embedding.
References
Shieh AD, Hashimoto TB, Airoldi EM (2011) Tree preserving embedding.
Proc Natl Acad Sci USA
108:16916--16921.