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RNAither (version 2.20.0)

trim: Compute the replicate mean with trimmed values

Description

Computes the mean of replicate values, omitting the highest and the lowest 5

Usage

trim(Ivec, na.rm = T)

Arguments

Ivec
All channel values for a specific siRNA/gene
na.rm
Removes NA values

Value

  • A double giving the trimmed mean of the given replicate values, i.e. omitting the highest and the lowest 5

See Also

rms, closestToZero, furthestFromZero, summarizeReps, summarizeRepsNoFiltering

Examples

Run this code
data(exampleHeader, package="RNAither")
data(exampleDataset, package="RNAither")

Indexes <- findReplicates(dataset, "GeneName", "CPSF1")
replicatemean <- trim(dataset$SigIntensity[Indexes])

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