umx (version 1.2.5)

umxSummaryCP: umxSummaryCP

Description

Summarise a Commmon Pathway model, as returned by umxCP

Usage

umxSummaryCP(model, digits = 2, file = getOption("umx_auto_plot"),
  returnStd = FALSE, extended = FALSE, showRg = TRUE, comparison = NULL,
  showStd = TRUE, CIs = FALSE, ...)

Arguments

model

A fitted umxCP model to summarize

digits

round to how many digits (default = 2)

file

The name of the dot file to write: NA = none; "name" = use the name of the model

returnStd

Whether to return the standardized form of the model (default = FALSE)

extended

how much to report (FALSE)

showRg

Whether to show the genetic correlations (FALSE) (Not implemented!)

comparison

Whether to run mxCompare on a comparison model (NULL)

showStd

Whether to show the standardized model (TRUE) (Not implemented!)

CIs

Confidence intervals (F)

...

Optional additional parameters

Value

• - optional mxModel

References

- http://www.github.com/tbates/umx, http://tbates.github.io

See Also

- umxCP(), plot(), umxSummary() work for IP, CP, GxE, SAT, and ACE models.

Other Twin Modeling Functions: umxACESexLim, umxACEcov, umxACE, umxCF_SexLim, umxCP, umxGxE_window, umxGxE, umxIP, umxPlotCP, umxPlotGxE, umxSummaryACEcov, umxSummaryACE, umxSummaryGxE, umxSummaryIP, umx_make_TwinData, umx

Examples

require(umx)
data(twinData)
labList = c("MZFF", "MZMM", "DZFF", "DZMM", "DZOS")
twinData$ZYG = factor(twinData$zyg, levels = 1:5, labels = labList)
selDVs = c("ht", "wt") # will be expanded into "ht1", "wt1", "ht2", "wt2"
mzData <- subset(twinData, ZYG == "MZFF")
dzData <- subset(twinData, ZYG == "DZFF")
m1 = umxCP(selDVs = selDVs, dzData = dzData, mzData = mzData, suffix = "")
m1 = mxRun(m1)
umxSummaryCP(m1, file = NA) # suppress plot creation with file
umxSummary(m1, file = NA) # generic summary is the same
stdFit = umxSummaryCP(m1, digits = 2, file = NA, returnStd = FALSE, 
		extended = FALSE, showRg = TRUE, showStd = TRUE, CIs = TRUE);
examples which will create graphical output
umxSummaryCP(fit);
umxSummaryCP(fit, file = "Figure 3", showStd = TRUE)