AFM (version 2.0)

generateReportFromNanoscopeImageDirectory: Generate a pdf report for all AFM images in a directory

Description

A function to generate a pdf report for each AFMImage in a directory. Images should be in export Nanoscope format as the importFromNanoscope function will be used.

Usage

generateReportFromNanoscopeImageDirectory(imageDirectory, imageNumber)

Arguments

imageDirectory

a directory where are located image as Nanoscope export format

imageNumber

(optional) an image number in the directory. If it is set only the selected image will be processed.

Examples

# NOT RUN {
library(AFM)
# A report will be generated for all the images in imageDirectory directory
# imageDirectory="c:/images"
imageDirectory=tempdir()
exit<-generateReportFromNanoscopeImageDirectory(imageDirectory)

# A report will be generated for the fifth image in the imageDirectory directory
exit<-generateReportFromNanoscopeImageDirectory(imageDirectory,5)
# }