AGDEX (version 1.16.0)

read.agdex.result: Read the output file of agdex analysis

Description

A function to read the output file produced by the function write.agdex.result

Usage

read.agdex.result(res.file)

Arguments

res.file

the name of output file of AGDEX analysis

Value

Returns a list of objects of result.

dex.compA

comparison definition for "A"

dex.compB

comparison definition for "B"

gwide.agdex.res

genome-wide AGDEX result

gset.res

gene-set Results

meta.dex.res

Individual Matched-Gene results

dex.resA

Individual Gene Results for comparison "A"

dex.resB

Individual Gene Results from comparison "B"

dex.asgnA

sample assignments for comparison "A"

dex.asgnB

aample assignments for comparison "B"

gset.listA

gene-set lists for comparison "A"

gset.listB

gene-set lists for comparison "B"

gset.list.agdex

gene-set lists for agdex analysis

See Also

agdex;write.agdex.result

Examples

#read agdex file from output file
## Not run: 
#  read.agdex.result("agdex.result.txt")
#  ## End(Not run)