AIMS (version 1.4.0)

mcgillExample: Sample of a breast cancer gene expression dataset generated at McGill University

Description

This is a breast cancer gene expression dataset generated at McGill University using the Affymetrix Gene ST platform. This is the validation dataset used in AIMS' paper and in use in the examples of AIMS.

Usage

mcgillExample

Value

• D
  A matrix of gene gene expression, rows are genes and columns are samples
• EntrezID
  A vector of Entrez ids corresponding to genes (rows) of D

Details

A sample of a breast cancer gene expression dataset currently generated at McGill University on the Affymetrix gene ST platform.

See Also

AIMSmodel, applyAIMS

Examples

## Load a sample of the McGill dataset used in the paper
data(mcgillExample)

## Dimensions of the gene expression matrix 
dim(mcgillExample$D)

## Number of EntrezID
length(mcgillExample$EntrezID)