ALLSPICER (version 0.1.9)

get_beta_hat: get_beta_hat

Description

simulation function: compute effect sizes estimated form linear regression model

Usage

get_beta_hat(Y, X, A, n_ind)

Value

A 2x`n_var` matrix of estimated effect size information (first row corresponds to the first phenotype, second row corresponds to the second phenotype)

Arguments

Y

phenotype information

X

genotype information

A

Allele frequency information

n_ind

total number of individuals

Examples

AC <- get_ac_mat(n_var=100)
A <- get_af_mat(AC=AC, n_ind=10000)
X <- get_geno_mat(AC, n_ind=10000)
b <- get_true_beta(n_var=100, c=0.6, pi=0.5, sigma=1, null=TRUE)
Y <- get_pheno_pair(b=b, X=X, r=0.5)
b_hat <- get_beta_hat(Y=Y, X=X, A=A, n_ind=10000)