get_geno_mat

simulation function: simulate genotype information for a set of loci with allele counts `AC`

Provides statistical tools to analyze heterogeneous effects of rare variants within genes that are associated with multiple traits. The package implements methods for assessing pleiotropic effects and identifying allelic heterogeneity, which can be useful in large-scale genetic studies. Methods include likelihood-based statistical tests to assess these effects. For more details, see Lu et al. (2024) <doi:10.1101/2024.10.01.614806>.

Wenhan Lu

ALLSPICER

ALLelic Spectrum of Pleiotropy Informed Correlated Effects

get_geno_mat function

<dl><dt>AC</dt>
<dd>allele counts of loci (length `m`)</dd>
<dt>n_ind</dt>
<dd>total number of indicitions</dd></dl>

Arguments

get_geno_mat — get_geno_mat

<dl>

<dt>AC</dt>
<dd>allele counts of loci (length `m`)</dd>


<dt>n_ind</dt>
<dd>total number of indicitions</dd>

</dl>

get_geno_mat: get_geno_mat

Description

Usage

Value

Arguments

Examples