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AMAP.Seq (version 1.0)

Compare Gene Expressions from 2-Treatment RNA-Seq Experiments

Description

An Approximated Most Average Powerful Test with Optimal FDR Control with Application to RNA-seq Data

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Version

Install

install.packages('AMAP.Seq')

Monthly Downloads

12

Version

1.0

License

GPL (>= 2)

Maintainer

Yaqing Si

Last Published

June 19th, 2012

Functions in AMAP.Seq (1.0)

RNASeq.Data

Standardize the data from RNA-seq experiment
AMAP.Seq.Internal

Internal functions/data for AMAP.Seq package
MGN.EM

Estimate the mixture gamma-normal (MGN) distribution using expectation-maximization (EM) algorithm
test.AMAP

Calculate the test statistics of the AMAP tests