APackOfTheClones

APackOfTheClones-package

<img src="figures/logo.png?package=APackOfTheClones&version=1.2.1" style="float: right" alt="logo" width="120">
Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles. The method was originally implemented by Murray Christian and Ben Murrell in the following immunology study: Ma et al. (2021) tools:::Rd_expr_doi("10.1126/sciimmunol.abg6356").

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Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles. The method was originally implemented by Murray Christian and Ben Murrell in the following immunology study: Ma et al. (2021) <doi:10.1126/sciimmunol.abg6356>.

Qile Yang

Visualization of Clonal Expansion for Single Cell Immune
Profiles

APackOfTheClones-package function

Maintainer: Qile Yang <a href="/link/qile.yang%40berkeley.edu?package=APackOfTheClones&version=1.2.1" data-mini-rdoc="APackOfTheClones::qile.yang@berkeley.edu">qile.yang@berkeley.edu</a> (<a href="https://orcid.org/0009-0005-0148-2499">ORCID</a>) [copyright holder]

Author

<img src='figures/logo.png' style='float: right' alt='logo' width='120' />
Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles. The method was originally implemented by Murray Christian and Ben Murrell in the following immunology study: Ma et al. (2021) tools:::Rd_expr_doi("10.1126/sciimmunol.abg6356").

APackOfTheClones: Visualization of Clonal Expansion for Single Cell Immune Profiles — APackOfTheClones-package

Maintainer: Qile Yang <a href='mailto:qile.yang@berkeley.edu'>qile.yang@berkeley.edu</a> (<a href='https://orcid.org/0009-0005-0148-2499'>ORCID</a>) [copyright holder]

APackOfTheClones-package: APackOfTheClones: Visualization of Clonal Expansion for Single Cell Immune Profiles

Description

Arguments

Author

See Also