ARTP2 v0.9.30.1
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by Han Zhang
Pathway and Gene-Level Association Test
Pathway and gene level association test using raw data or summary statistics.
Readme
ARTP2
An enhanced R package of biological pathway analysis and pathway meta-analysis for genome-wide association studies.
Functions in ARTP2
| Name | Description | |
| exclude.snps | Excluding SNPs from specified regions | |
| meta | ||
| ARTP2-package | ||
| options | options | |
| geno | ||
| inflation | ||
| data | ||
| options.default | ||
| rARTP | ARTP test for raw data | |
| pathway | ||
| warm.start | ||
| ref.geno | ||
| read.bed | Reading data from binary PLINK files | |
| subj.id | ||
| sARTP | ARTP test for summary data | |
| No Results! | ||
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Details
| Type | Package |
| Date | 2016-07-11 |
| License | GPL-2 | GPL-3 |
| URL | https://github.com/zhangh12/ARTP2 |
| BugReports | https://github.com/zhangh12/ARTP2/issues |
| SystemRequirements | C++11 |
| NeedsCompilation | yes |
| Packaged | 2016-07-11 12:40:03 UTC; ripley |
| Repository | CRAN |
| Date/Publication | 2016-07-11 14:43:11 |
| depends | data , data.table , Formula , parallel , R (>= 2.10) , stats , utils |
| Contributors | R team, Han Zhang, Bill Wheeler, Kai Yu, Yifan Yang |
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