ARUtools (version 0.7.2)

check_problems: Check problems in output of clean_metadata()

Description

Cleaning metadata can take a series of tries. This function helps summarize and explore missing metadata (problems).

Usage

check_problems(
  df,
  check = c("site_id", "aru_id", "date", "date_time", "longitude", "latitude"),
  path = FALSE,
  date = FALSE
)

Value

A data frame summarizing the metadata by site_id, aru_type, aru_id, and (optionally) by date. Presents the number of files, directories, and days worth of recordings, as well as the minimum and maximum recording times.

Arguments

df

Data frame. Either meta data (clean_metadata()) or GPS coordinates (clean_gps())

check

Character. Character vector of columns to check for missing values. Default is site_id, aru_id, date, date_time, longitude and latitude.

path

Logical. Whether to return just the file paths which have missing attributes. Default FALSE

date

Logical. Whether to summarize output by date (as well as site_id and aru_id. Default FALSE.

Examples

m <- clean_metadata(project_files = example_files, pattern_aru_id = "test")

check_problems(m)
check_problems(m, date = TRUE)
check_problems(m, path = TRUE)