callrate

internal

Presents a series of molecular and genetic routines in the R
environment with the aim of assisting in analytical pipelines before
and after the use of 'asreml' or another library to perform analyses such
as Genomic Selection or Genome-Wide Association Analyses.
Methods and examples are described in Gezan, Oliveira, Galli, and Murray (2022)
<https://asreml.kb.vsni.co.uk/wp-content/uploads/sites/3/ASRgenomics_Manual.pdf>.

Salvador Gezan

ASRgenomics

Complementary Genomic Functions

Darren Murray

Amanda Avelar de Oliveira

Giovanni Galli

VSN International 

callrate function

<dl><dt>M</dt>
<dd>The additive \(n \times p\) matrix with any coding (default = <code>NULL</code>).</dd>
<dt>margin</dt>
<dd>A character indicating the margin for call rate calculations.
Options are: <code>row</code> and <code>col</code> (default = <code>row</code>).</dd></dl>

Arguments

Estimates call rate — callrate

<dl>

<dt>M</dt>
<dd>The additive \(n \times p\) matrix with any coding (default = <code>NULL</code>).</dd>


<dt>margin</dt>
<dd>A character indicating the margin for call rate calculations.
Options are: <code>row</code> and <code>col</code> (default = <code>row</code>).</dd>

</dl>

Estimates call rate

callrate: Estimates call rate

Description

Usage

Value

Arguments