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AdhereR (version 0.4)

Adherence to Medications

Description

Computation of adherence to medications from Electronic Health care Data and visualization of individual medication histories and adherence patterns. The package implements a set of S3 classes and functions consistent with current adherence guidelines and definitions. It allows the computation of different measures of adherence (as defined in the literature, but also several original ones), their publication-quality plotting, the estimation of event duration and time to initiation, the interactive exploration of patient medication history and the real-time estimation of adherence given various parameter settings. It scales from very small datasets stored in flat CSV files to very large databases and from single-thread processing on mid-range consumer laptops to parallel processing on large heterogeneous computing clusters. It exposes a standardized interface allowing it to be used from other programming languages and platforms, such as Python.

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Install

install.packages('AdhereR')

Monthly Downloads

502

Version

0.4

License

GPL (>= 2)

Issues

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Maintainer

Dan Dediu

Last Published

February 10th, 2019

Functions in AdhereR (0.4)

CMA5

CMA5 constructor.
callAdhereR

callAdhereR.
plot_interactive_cma

Interactive exploration CMA computation.
plot.CMA_per_episode

Plot CMA_per_episode and CMA_sliding_window objects.
durcomp.dispensing

Example dispensing events for 16 patients.
durcomp.hospitalisation

Example hospitalization events for 10 patients.
getCallerWrapperLocation

getCallerWrapperLocation.
compute.event.int.gaps

Gap Days and Event (prescribing or dispensing) Intervals.
med.events

Example medication events records for 100 patients.
getCMA

Access the actual CMA estimate from a CMA object.
plot.CMA0

Plot CMA0 objects.
plot.CMA1

Plot CMA0-derived objects.
CMA7

CMA7 constructor.
compute.treatment.episodes

Compute Treatment Episodes.
print.CMA0

Print CMA0 (and derived) objects.
time_to_initiation

Computation of initiation times.
compute_event_durations

Computation of event durations.
CMA2

CMA2 and CMA4 constructors.
CMA6

CMA6 constructor.
CMA0

CMA0 constructor.
CMA_per_episode

CMA_per_episode constructor.
CMA_sliding_window

CMA_sliding_window constructor.
CMA8

CMA8 constructor.
CMA9

CMA9 constructor.
CMA1

CMA1 and CMA3 constructors.
durcomp.prescribing

Example prescription events for 16 patients.