AgiMicroRna (version 2.22.0)

esetMicroRna: ExpressionSet object from a uRNAList

Description

It creates an 'ExpressionSet' object from a 'uRNAList' with unique probe names Tipically, the 'uRNAList object' contains the Total Gene Processed data

Usage

esetMicroRna(uRNAList, targets, makePLOT=FALSE,verbose=FALSE)

Arguments

uRNAList

An uRNAList containing normally the processed data

targets

data.frame with the targets structure

makePLOT

logical, if TRUE it makes a 'heatmap' with the 100 greater variance genes, a 'hierarchical cluster' with all the genes and a pca plot

verbose

logical, if TRUE prints out output

Value

An ExpressionSet object

Details

It creates an ExpressionSet object from a uRNAList. Usually this function is applied to an uRNAList object containing the Total Gene Processed data.

See Also

An 'uRNAList' example containing proccesed data is in ddPROC and an overview of how the processed data is produced is given in filterMicroRna