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AlgebraicHaploPackage (version 1.2)
Haplotype Two Snips Out of a Paired Group of Patients
Description
Two unordered pairs of data of two different snips positions is haplotyped by resolving a small number ob closed equations.
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Version
Version
1.2
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Install
install.packages('AlgebraicHaploPackage')
Monthly Downloads
230
Version
1.2
License
GPL-2
Maintainer
Jan Wolfertz
Last Published
October 31st, 2015
Functions in AlgebraicHaploPackage (1.2)
Search functions
cubic
Function that can resolve the cubic equation numerical stable and any lower dimensional case except unsolvable cases.
findoptimal
Chose the most likely solution of the three potential onces.
haplotypeit
Haplotype a 3 x 3 counting matrix.
callhaplotype
calcultes the cotigency table of the haplotypes
optimalfrequency
Evaluate potential haplotypes.
AlgebraicHaploPackage-package
AlgebraicHaploPackage--- The package haplotype a contingency of two pairs of snips of a sample.