Learn R Programming

AlgebraicHaploPackage (version 1.2)

Haplotype Two Snips Out of a Paired Group of Patients

Description

Two unordered pairs of data of two different snips positions is haplotyped by resolving a small number ob closed equations.

Copy Link

Version

Install

install.packages('AlgebraicHaploPackage')

Monthly Downloads

270

Version

1.2

License

GPL-2

Maintainer

Jan Wolfertz

Last Published

October 31st, 2015

Functions in AlgebraicHaploPackage (1.2)

cubic

Function that can resolve the cubic equation numerical stable and any lower dimensional case except unsolvable cases.
findoptimal

Chose the most likely solution of the three potential onces.
haplotypeit

Haplotype a 3 x 3 counting matrix.
callhaplotype

calcultes the cotigency table of the haplotypes
optimalfrequency

Evaluate potential haplotypes.
AlgebraicHaploPackage-package

AlgebraicHaploPackage--- The package haplotype a contingency of two pairs of snips of a sample.