AlphaSimR (version 0.10.0)

SimParam_setTrackPed: Set pedigree tracking

Description

Sets pedigree tracking for the simulation. By default pedigree tracking is turned off. When turned on, the pedigree of all individuals created will be tracked, except those created by hybridCross. Turning off pedigree tracking will turn off recombination tracking if it is turned on.

Arguments

isTrackPed

should pedigree tracking be on.

force

should the check for a running simulation be ignored. Only set to TRUE if you know what you are doing.

Usage

SP$setTrackPed(isTrackPed, force = FALSE)

Examples

# NOT RUN {
#Create founder haplotypes
founderPop = quickHaplo(nInd=10, nChr=1, segSites=10)

#Set simulation parameters
SP = SimParam$new(founderPop)
SP$setTrackPed(TRUE)

# }