Learn R Programming

AncestryMapper (version 2.0)

Assigning Ancestry Based on Population References

Description

Assigns genetic ancestry to an individual and studies relationships between local and global populations.

Copy Link

Version

Install

install.packages('AncestryMapper')

Monthly Downloads

211

Version

2.0

License

GPL-2

Maintainer

Eoghan O'Halloran

Last Published

September 28th, 2016

Functions in AncestryMapper (2.0)

arithmeticRefsMedoids

Object each reference file is assigned as it is loaded in or read.
MinMaxFreq

Allele Variants for Demo SNPs According to dbSNP.
refAdd

Add individuals to the CorPheno file.
calculateAMids

Calculate genetic distances.
AncestryMapper

Ancestry Mapper 2.0
calculateAMidsArith

Calculate genetic distances.
createMedoid

Creates Ancestry Mapper Population Reference.
plotAMids

Visualises genetic distances.