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AncestryMapper (version 2.0)
Assigning Ancestry Based on Population References
Description
Assigns genetic ancestry to an individual and studies relationships between local and global populations.
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Version
Version
2.0
1.2
1.1
1.0
Install
install.packages('AncestryMapper')
Monthly Downloads
211
Version
2.0
License
GPL-2
Maintainer
Eoghan O'Halloran
Last Published
September 28th, 2016
Functions in AncestryMapper (2.0)
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arithmeticRefsMedoids
Object each reference file is assigned as it is loaded in or read.
MinMaxFreq
Allele Variants for Demo SNPs According to dbSNP.
refAdd
Add individuals to the CorPheno file.
calculateAMids
Calculate genetic distances.
AncestryMapper
Ancestry Mapper 2.0
calculateAMidsArith
Calculate genetic distances.
createMedoid
Creates Ancestry Mapper Population Reference.
plotAMids
Visualises genetic distances.