Rdocumentation
powered by
Learn R Programming
AneuFinder (version 1.0.3)
hotspotter: Find hotspots of genomic events
Description
Find hotspots of genomic events by using kernel
density
estimation.
Usage
hotspotter(gr.list, bw, pval = 1e-08)
Arguments
gr.list
A list with
GRanges
object containing the coordinates of the genomic events.
bw
Bandwidth used for kernel density estimation (see
density
).
pval
P-value cutoff for hotspots.
Value
A
GRanges
object containing coordinates of hotspots with p-values.