AnnotationDbi (version 1.34.3)

HOMO_SAPIENS: Descriptions of available values for columns and keytypes for inparanpoid packages.

Description

When the user calls columns or keytypes for an inparanoid package, the columns and keytypes methods will give the full genus and species names of all the organisms that are available.

Details

All the possible values for columns and keytypes are listed below. [object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

To get the latest information about the date stamps and source URLS for the data used to make an annotation package, please use the metadata method as shown in the example below.

Examples

library(hom.Hs.inp.db)
  ## List the possible values for columns
  columns(hom.Hs.inp.db)
  ## List the possible values for keytypes
  keytypes(hom.Hs.inp.db)
  ## get some values back
  keys <- head(keys(hom.Hs.inp.db, keytype="HOMO_SAPIENS"))
  keys
  select(hom.Hs.inp.db, keys=keys, columns=c("BOS_TAURUS","EQUUS_CABALLUS"),
  keytype="HOMO_SAPIENS")

  ## More infomation about the dates and original sources for these data:
  metadata(hom.Hs.inp.db)