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AnnotationFuncs (version 1.22.0)
Annotation translation functions
Description
Functions for handling translating between different identifieres using the Biocore Data Team data-packages (e.g. org.Bt.eg.db).
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Version
1.22.0
1.20.0
1.18.0
1.16.0
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Version
1.22.0
License
GPL-2
Maintainer
Stefan McKinnon Edwards
Last Published
November 29th, 2010
Functions in AnnotationFuncs (1.22.0)
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.getTableName
Gets the table name from the INPARANOID style genus names.
getOrthologs
Performs quicker lookup for orthologs in homologe data packages...
translate
Translate between different identifiers...
.pickRef
Secret function that does the magic for pickRefSeq.
.dbEscapeString
Private Escape string...
pickGO
Cleans up result from org...
AnnotationFuncs-package
Annotation translation functions
removeNAs
Removes entries equal NA from list or vector...
mapLists
Replaces contents of list A with elements of list B...
pickRefSeq
Picks a prioritised RefSeq identifier from a list of identifiers...
getEvidenceCodes
Returns GO evidence codes.