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ArchR (version 1.0.0)

import10xFeatureMatrix: Import Feature Matrix from 10x Feature HDF5 file.

Description

This function will import the feature matrix from a 10x feature hdf5 file.

Usage

import10xFeatureMatrix(
  input = NULL,
  names = NULL,
  featureType = "Gene Expression"
)

Arguments

input

A character of paths to 10x feature hdf5 file(s). These will traditionally have a suffix similar to "filtered_feature_bc_matrix.h5".

names

A character of sample names associated with each input file.

featureType

The name of the feature to extract from the 10x feature file. See https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/advanced/h5_matrices for more information.