PhasesMCMC-class

.PhasesMCMC

An S4 class to represent a collection of phases.

internal

Statistical analysis of archaeological dates and groups of
dates. This package allows to post-process Markov Chain Monte Carlo
(MCMC) simulations from 'ChronoModel' <https://chronomodel.com/>,
'Oxcal' <https://c14.arch.ox.ac.uk/oxcal.html> or 'BCal'
<https://bcal.shef.ac.uk/>. It provides functions for the study of
rhythms of the long term from the posterior distribution of a series
of dates (tempo and activity plot). It also allows the estimation and
visualization of time ranges from the posterior distribution of groups
of dates (e.g. duration, transition and hiatus between successive
phases) as described in Philippe and Vibet (2020)
<doi:10.18637/jss.v093.c01>.

Anne Philippe

ArchaeoPhases

Post-Processing of Markov Chain Monte Carlo Simulations for
Chronological Modelling

Marie-Anne Vibet

Nicolas Frerebeau

Thomas S. Dye

Nantes Université 

Université Bordeaux Montaigne 

CNRS 

PhasesMCMC-class function

<dl>
<dt><code>labels</code></dt>
<dd>A <code><a href="/link/character?package=ArchaeoPhases&version=2.1.0" data-mini-rdoc="ArchaeoPhases::character">character</a></code> vector specifying the name of the phases.</dd></dl>
<dt><code>hash</code></dt>
<dd>A <code><a href="/link/character?package=ArchaeoPhases&version=2.1.0" data-mini-rdoc="ArchaeoPhases::character">character</a></code> string giving the 32-byte MD5 hash of the
original data file.</dd>

Slots

In the code snippets below, <code>x</code> is a <code>PhasesMCMC</code> object.<dl>
<dt><code>x[[i]]</code></dt>
<dd>Extracts a single phase (two chains) selected by subscript
<code>i</code>. <code>i</code> is a length-one <code><a href="/link/numeric?package=ArchaeoPhases&version=2.1.0" data-mini-rdoc="ArchaeoPhases::numeric">numeric</a></code> or <code><a href="/link/character?package=ArchaeoPhases&version=2.1.0" data-mini-rdoc="ArchaeoPhases::character">character</a></code> vector.</dd>
</dl>

Subset

Author

MCMC Phases — PhasesMCMC-class

<dl>
<dt><code>labels</code></dt>
<dd>A <code><a href='https://rdrr.io/r/base/character.html'>character</a></code> vector specifying the name of the phases.</dd>


<dt><code>hash</code></dt>
<dd>A <code><a href='https://rdrr.io/r/base/character.html'>character</a></code> string giving the 32-byte MD5 hash of the
original data file.</dd>


</dl>

In the code snippets below, <code>x</code> is a <code>PhasesMCMC</code> object.<dl>
<dt><code>x[[i]]</code></dt>
<dd>Extracts a single phase (two chains) selected by subscript
<code>i</code>. <code>i</code> is a length-one <code><a href='https://rdrr.io/r/base/numeric.html'>numeric</a></code> or <code><a href='https://rdrr.io/r/base/character.html'>character</a></code> vector.</dd>


</dl>

PhasesMCMC-class: MCMC Phases

Description

Arguments

Slots

Subset

Author

Details

See Also