ArrayTools (version 1.32.0)

createExpressionSet: Creating an ExpressionSet

Description

Create an ExpressionSet based on phenotype data and expression data

Usage

createExpressionSet(pData, exprs, ...)

Arguments

pData

a data frame contains the phenotype data

exprs

a data frame contains the expression data

...

addtional arguments passed to new("ExpressionSet", exprs, phenoData, ...) if needed

Value

an ExpressionSet

References

Bioconductor: Open software development for computational biology and bioinformatics R. Gentleman, V. J. Carey, D. M. Bates, B.Bolstad, M. Dettling, S. Dudoit, B. Ellis, L. Gautier, Y. Ge, and others 2004, Genome Biology, Vol. 5, R80

See Also

ExpressionSet

Examples

  data(pDataExample)
  data(exprsExample)
  eSet <- createExpressionSet (pDataExample, exprsExample, 
      annotation = "hugene10sttranscriptcluster")