ArrayTools (version 1.32.0)

createGSEAFiles: A Wrapper Function to create *.GCT and *.CLS for GSEA analysis

Description

A Wrapper Function to create *.GCT and *.CLS for GSEA analysis

Usage

createGSEAFiles(mydir = getwd(), eSet, catVar)

Arguments

mydir

directory where you would like to store the files

eSet

an ExpressionSet

catVar

variable of interest

Value

Creating *.GCT and *.CLS for GSEA

References

http://www.broad.mit.edu/gsea/

See Also

output.cls, output.gct

Examples

data(eSetExample)
## Not run: createGSEAFiles (mydir, eSetExample, "Treatment")