ArrayTools (version 1.32.0)

preProcess3prime: A wrapper function to normalize the the 3 prime array

Description

A wrapper function to normalize the 3 prime array by using either RMA or GCRMA method

Usage

preProcess3prime(object, method = c("rma", "gcrma"), output = FALSE, mydir = getwd())

Arguments

object

an AffyBatch.

method

either rma or gcrma

output

If output = TRUE, it will output the preprocessed data in the specified direcotry from the mydir argument

mydir

specifed directory to contain the output

Value

an ExpressionSet

See Also

~~objects to See Also as help, ~~~

Examples

if (require(affydata)) {
    data(Dilution)
    eset <- preProcess3prime(Dilution)
}