AtlasRDF (version 1.8.0)

getPathwayUriFromName: Get pathway URI given a pathway name

Description

Given the name of a pathway find URI(s) that match this name

Usage

getPathwayUriFromName(name, endpoint = "http://www.ebi.ac.uk/rdf/services/atlas/sparql")

Arguments

name

The textual name of the pathway to search for

endpoint

The location of the SPARQL endpoint - default value is live Atlas endpoint

Value

data frame containing slots

pathwayuri

The URI of the corresponding pathway

label

The textual human readable name of the pathway

Examples

    ##get pathways which have the phrase 'ligand binding' included in their name
    #getPathwayUriFromName("ligand binding")