compute_score_table

Compute scoring table based on training dataset

A novel interpretable machine learning-based framework to automate the development of a clinical scoring model for predefined outcomes. Our novel framework consists of six modules: variable ranking with machine learning, variable transformation, score derivation, model selection, domain knowledge-based score fine-tuning, and performance evaluation.The details are described in our research paper<doi:10.2196/21798>. Users or clinicians could seamlessly generate parsimonious sparse-score risk models (i.e., risk scores), which can be easily implemented and validated in clinical practice. We hope to see its application in various medical case studies.

Feng Xie

AutoScore

An Interpretable Machine Learning-Based Automatic Clinical Score
Generator

Yilin Ning

Han Yuan

Mingxuan Liu

Siqi Li

Ehsan Saffari

Bibhas Chakraborty

Nan Liu

compute_score_table function

<dl><dt>train_set_2</dt>
<dd>Processed training set after variable transformation (AutoScore Module 2)</dd>
<dt>max_score</dt>
<dd>Maximum total score</dd>
<dt>variable_list</dt>
<dd>List of included variables</dd></dl>

Arguments

Internal function: Compute scoring table based on training dataset (AutoScore Module 3) — compute_score_table

<dl>

<dt>train_set_2</dt>
<dd>Processed training set after variable transformation (AutoScore Module 2)</dd>


<dt>max_score</dt>
<dd>Maximum total score</dd>


<dt>variable_list</dt>
<dd>List of included variables</dd>

</dl>

compute_score_table: Internal function: Compute scoring table based on training dataset (AutoScore Module 3)

Description

Usage

Value

Arguments